Command Line Interface

bioversions automatically installs the command bioversions. See bioversions --help for usage details.

bioversions

The bioversions CLI.

Usage

bioversions [OPTIONS] COMMAND [ARGS]...

Options

--version

Show the version and exit.

get

Print the version.

Usage

bioversions get [OPTIONS] KEY

Options

-v, --verbose

Enable verbose mode. More -v’s means more verbose.

Arguments

KEY

Required argument

ls

List versions.

Usage

bioversions ls [OPTIONS]

Options

-t, --terse

update

Update the data file.

Usage

bioversions update [OPTIONS]

Options

--force

web

Run the bioversions web application.

Usage

bioversions web [OPTIONS]

Options

--host <host>

Flask host.

Default:

'0.0.0.0'

--port <port>

Flask port.

Default:

5000

--with-gunicorn

Use gunicorn instead of flask dev server

--server <server>

The server to use

Options:

flask | hypercorn | uvicorn | gunicorn

--workers <workers>

Number of workers (e.g., when using gunicorn)

Default:

5

-v, --verbose

Enable verbose mode. More -v’s means more verbose.

--timeout <timeout>

The timeout used for gunicorn

--debug

Run flask dev server in debug mode (when not using –with-gunicorn)